rs48846418 SNP Detail

Summary

• ID
  rs48846418
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56022406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTATAAT TGGGTCCTAG
  GGTTTTGCTT GTGAATCCTC ACACATTACC GTTTATAGTC CCACCTTTCT GAAATACAGT
  AGTAGTCTAC TGTGGGTCCT CATTTCCTTA AAACAAAACA AAACTATTCA GATCCTAGCT
  GTTTAAATGT GTCTTGAACA CATAAAATTG TTTTTGGTAT TATAGAAACA ATAGAAATAC
  M
  CCACCACTGG AAACTAGTGC ACAGCTAATT TCAGAGGCAT TTATTGTACA GCTCTTCCCT
  GTGTGACTGG GTTTTTTTTT GTTTGTTTGT TTGTTTTGTT TTGTTTTTTG TTTGTTTTGT
  TTTGGGGTTT TTTGTTTGAT TGTTTTTTGT TCTTGGTTTT TTGGGACAGG GTTTCTCTGT
  ATAGCCCTGG CTGTCCTGGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133220322	ENSMUSSNP3609320	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48846418					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56022406 () rs orientation: forward

Symbol	Name	Function Class
Rr631042	regulatory region 631042	340 bp distal