rs48825065 SNP Detail

Summary

• ID
  rs48825065
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143103941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTC GCTGTTGCAG AAGACACGGG
  K
  TCGATTCTTA CCATCCACAT GGCAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147782098	ENSMUSSNP1063940	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss321404567	CHEV_4_142967274	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48825065					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143103941 () rs orientation: forward

Symbol	Name	Function Class
Rr604202	regulatory region 604202	1983 bp proximal