rs48809767 SNP Detail

Summary

• ID
  rs48809767
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136799830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG CATCAGAAGT TCAAGGTCAT
  Y
  TTTAGCTGTT TAGCGAGTTC AAAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147592768	ENSMUSSNP795537	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss321360834	CHEV_4_136628434	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48809767					SNP	T	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136799830 () rs orientation: forward

Symbol	Name	Function Class
Gm68277	predicted gene, 68277	within coordinates
Rr602532	regulatory region 602532	1003 bp distal
Rr602533	regulatory region 602533	within coordinates
Rr602534	regulatory region 602534	261 bp proximal