rs48797428 SNP Detail

Summary

• ID
  rs48797428
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60704203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATTTATGC TTACCCTTAC
  ATGAAAATAA ATACAAAAAT CATTAATATT TTTTTCAGTT ACATTTATTG AGACTTTCTG
  CTCCAGTTAC TCAAAGAAAT TGTGTTTAAC TAGTCCCTCA TAGAGTTTAC AGTGTATTGG
  CAGAAAAAAA TATAAAAAGC TGTTAGAATA AAATACAACG ATTGGTAGAG GAGTAAGAAT
  T
  TGTGTCTCAC AGGATCCATA AGAGTAAAGC GCTCTACACT GAAGACACAT GGAAACATCT
  TTGAGACTGA GAGGAGTCAC ACTTTTAGAG ATCCCATGAA GTCTTACTAG AGGCCATGAT
  CGCAGCCCAC TGACCAACCT GAAGAGAAGA CAGTATTGAA CCCTAAACTG ACAGGGTGCT
  TAGGATTTGA AGGTTAATCA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135220973	ENSMUSSNP5614414	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs48797428					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60704203 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577459	regulatory region 577459	1044 bp proximal