rs48795656 SNP Detail

Summary

• ID
  rs48795656
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120871059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATA AAGGAATATA TGTGGGGAGG
  S
  TATGTGTGAG TTCTGTATAA GGATA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147376964	ENSMUSSNP7104834	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320481390	CHEV_2_120866314	CHEVERUD	SCREENING_POP	f	SNP		C	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48795656					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120871059 () rs orientation: forward

Symbol	Name	Function Class
Rr563766	regulatory region 563766	973 bp distal
Rr563767	regulatory region 563767	614 bp proximal
Rr563768	regulatory region 563768	694 bp proximal