rs48784115 SNP Detail

Summary

• ID
  rs48784115
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70011011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTCCATC CTCAGGCCAG
  TACCTGTCAG AAGGGAACTG CAAGCCTTGC AGAGAGGGTA TTGACTACAC CAGCCATTCC
  AACCATTCTC TGGATTCATG TATTCTCTGC ACAGTCTGTA AGGAAGGTAC AGAGCAAAGG
  GGCCCTTCCC ACAGGAGGAG CATGGGCAGG GGGATTCATA ACTGCAGTGA ACTGGAAAAC
  T
  TCAGTTCCAG CCATCTTGAT CTTCATTTTT CCCTGTTCTC CGCCTGTCTT TAGTTCAATG
  GGACAAAACC ACAAGTTGTG CTGTGTTTTA GGAATCATTG ATACCATCTG TTAAGAATGG
  GGTAGTGTGC CCTGTGGAGC CCCCCCCCCC GTGCCCTCAG ATGTATTGTG GGACAGTTGC
  CACTGCCCTT ACTATGAACA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss139676608	ENSMUSSNP6932365	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48784115					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70011011 () rs orientation: forward

Symbol	Name	Function Class
Rr494754	regulatory region 494754	467 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Intron
Tssr126377	transcription start site region 126377	1546 bp upstream
Tssr126378	transcription start site region 126378	1595 bp upstream