rs48765158 SNP Detail

Summary

• ID
  rs48765158
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188757344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA GAGAAAGGCA CAGGACATTA
  C
  CAAACTTCTT ACAAAGTCAG GACTG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146483433	ENSMUSSNP3674589	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320190144	CHEV_1_190849026	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48765158					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188757344 () rs orientation: forward

Symbol	Name	Function Class
Rr372621	regulatory region 372621	within coordinates
Rr425741	regulatory region 425741	1147 bp distal
Rr425742	regulatory region 425742	1688 bp distal
Rr425743	regulatory region 425743	1795 bp proximal