rs48761878 SNP Detail

Summary

• ID
  rs48761878
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162001697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGCTTTGAG CGATACAGAA GAGGCTGCAC TTGTTCTCTG
  TGGTCTTTTC CAGAAAATGA AAGCAAGGAT CCACTCCCTA CTTACAAGGC ATTTTTACCC
  Y
  AAACTACCTG ATAAAGTCAT TAGAAAACAT GGATGTTAAA GACCAATATG ATTTGTTAAT
  ATGGATTAAA AAAAAATTCC TAACCACATA TCACTAAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145930504	ENSMUSSNP3033046	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48761878					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162001697 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				Noncoding-Transcript-Variant
Rr421925	regulatory region 421925			1017 bp distal