rs48761166 SNP Detail

Summary

• ID
  rs48761166
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:154149538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGC CGGTCAACCT CTCATCCATT
  S
  ACACATACAT CCACACACCT GCTCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148097613	ENSMUSSNP1272648	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321438309	CHEV_4_153439190	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48761166					SNP	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154149538 () rs orientation: forward

Symbol	Name	Function Class
Rr606065	regulatory region 606065	243 bp proximal
Rr606066	regulatory region 606066	487 bp proximal
Trp73	transformation related protein 73	Intron