rs48755870 SNP Detail

Summary

• ID
  rs48755870
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71789111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAGTTCCTT ATAAACCAGA TATGGTGGAA CACAATCTGC
  AATGCTAGCA TTCAGGGGGA TTAGAACCTC AAGGGAACTT CAGCTATATA GAGAACAAGG
  S
  AGGCCTGGAA CATATGAGAC TCCATCTCAA AAATACAAAA CCAAAGTAAA AATTCTAAGT
  ATAAATGAGT TAAAGATTTT AAACGTGGGA GGTAACAAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133277420	ENSMUSSNP3764452	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss321818419	CHEV_6_71762121	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48755870					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71789111 () rs orientation: forward

Symbol	Name	Function Class
Mrpl35	mitochondrial ribosomal protein L35	870 bp downstream
Reep1	receptor accessory protein 1	1417 bp downstream
Rr632010	regulatory region 632010	851 bp proximal