rs48752465 SNP Detail

Summary

• ID
  rs48752465
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148590763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTATCC TTTGTTTAGT
  TTATATGCAG TTGATATCTA TTAGTATATT TGAAAGTAAG TTAGTTTATC AACTCTAAGT
  AACAGAATTG AACTCCAACA TTATTGAAGA ATAAAATGTC ATCTTCAGGT ATGATTGTAA
  TTCTAGCCAC TCTGGGGGAC TGAAGAAGTG AGACCGCTCA CTTGGGGCTA GCCAGGGGTA
  Y
  GCAGCCAAAC TCTGTCCCAG AAAAACAAAA TAACAAAACC CAAAAGATAT CCCAGGATAT
  ATAAACAAAT TTCACTAAGG AATCAATCAT TCAACATATA ATTGGCGGTT TTACCTTCTG
  TGCCAAGTAA CTTCTCAAAG GCTCACAATA TTTAAAAGCA TGGAAGAAAA GGGATATCAC
  ACTATCAGCT TTGTAAACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136064822	ENSMUSSNP6973758	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48752465					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148590763 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587220	regulatory region 587220	1040 bp proximal