rs48724764 SNP Detail

Summary

• ID
  rs48724764
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87156152 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G AGCATGGCAG CATCCAGGCA GGCATGGTGC AGGAGGAGCT
  GAGAGTTCTG AACCTTCATC TGAAGGCTGC TAGCAGAATA CTGACTTCCA GGCAGCTAGG
  T
  TGAGGGTCTT AAAGCCCACA CCTACAGTGA CACACCTACT CCAACAAGGC CATACCTTCT
  AATAATGCCA CTCCCTGGGC TAAGCTTATA CAAACCACCA C                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147982647	ENSMUSSNP5664506	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48724764					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87156152 () rs orientation: reverse

Symbol	Name	Function Class
Rr579465	regulatory region 579465	1162 bp distal
Tssr33932	transcription start site region 33932	814 bp downstream