rs48724441 SNP Detail

Summary

• ID
  rs48724441
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141164558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATACATCTA AAAAATAAAA
  TACATCGGTG GGTACATTAC CAGAGAAATG GGGAAACTTT TCTATAGACT TAATATGCTA
  TCTGTCAGTT TAGCTTCTGG ATTGGTGGAC ACCAGTTGTC TGCTAAATCT ATAAACTCTA
  AAAGGTTTTT GTCTGTTGTC ATAATCTGTT CGTTCTGACA CAGGTTGAAG GCTGCTCCAG
  G
  GGGCTGGAAT TTGGCCCAAC GATAGGGGAA TTAACCTCTG GATGGGCAAC ACTCCAGCCT
  TTCCACTGTG TTGATATTCT TCTTTTTTTT TTTTTGTTTT TTGTTTTTCA AGACAGGGCT
  TCTCTGTGTA TCCCTGGCTG TCCCAGAACT CACTCTGTAG ACCAGGCTGG CCTCAAACTC
  AGAAATCCGC CTGCCTCTGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147736961	ENSMUSSNP6597428	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs48724441					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141164558 () rs orientation: forward

Symbol	Name	Function Class
Rr603766	regulatory region 603766	1940 bp proximal
Srarp	steroid receptor associated and regulated protein	1142 bp upstream