rs48720571 SNP Detail

Summary

• ID
  rs48720571
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116687574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTT CCCTCTTACC AGTGTGTCAA
  R
  TTGACAATTA TGATCAGTTG TCACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133578794	ENSMUSSNP5688827	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48720571					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116687574 () rs orientation: forward

Symbol	Name	Function Class
Rr637245	regulatory region 637245	1672 bp proximal
Rr637246	regulatory region 637246	1949 bp proximal
Tmem72	transmembrane protein 72	Intron