rs48719382 SNP Detail

Summary

• ID
  rs48719382
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150156690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGT TCTGAGTTCA ATTCCCATCA
  R
  CCACATGGTG GCTCACAACC ATCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148046764	ENSMUSSNP5619629	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321427958	CHEV_4_149446342	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48719382					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150156690 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	431 bp downstream
Gm37795	predicted gene, 37795	1236 bp downstream
Rr605164	regulatory region 605164	1659 bp distal
Rr605165	regulatory region 605165	357 bp proximal
Rr605166	regulatory region 605166	1026 bp proximal