rs48711324 SNP Detail

Summary

• ID
  rs48711324
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87073683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGGCAGCC TACATGAGCT ACAAGGTGAG ACATATCAAC
  AGAACAAAGC AGTCAGCAGT GGTGGCGCAC GCTTTTAATC CCAGCACTCT GGAGGCAGAG
  G
  CAGGCAGAGT TTGGGGCCAG CCTGGTCTAC AAAGCTAGTT CCAGGTCAGC CAGAGCTAAA
  CAAAACAAAA CAACCAAACA ACAACAACAA AAACAATAA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135454915	ENSMUSSNP1064660	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48711324					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87073683 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	187 bp distal
Rr579451	regulatory region 579451	1939 bp distal
Rr579452	regulatory region 579452	431 bp distal