rs48710388 SNP Detail

Summary

• ID
  rs48710388
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131592586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGTGATAGC TCCAGGGTCA TCCAAGGGAG GCTGATCGGT
  GTCCTATTTG AGAGAGCAGA GCTGTTAGCC TGGTAGGGTT GGTATAGGAA AGCATAGAAA
  Y
  ACTCGTGGAC CCTTCTTTAT TCTCTCAGAA CGATTAACCA GCGTGGCCTC AAGAATCCCC
  TGATCCCCAT CCTCCATGTC TCAGCCAGTC TCAAATGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147611553	ENSMUSSNP6887719	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48710388					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131592586 () rs orientation: forward

Symbol	Name	Function Class
Gm30986	predicted gene, 30986	1241 bp downstream
Rr565306	regulatory region 565306	38 bp distal