rs48702312 SNP Detail

Summary

• ID
  rs48702312
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4652477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TACATGAAAA TTTAAAACTT AATTCCAAGT TCTATTAGAT
  GAAAAATCAA AACTTAAACA TGCCAAAAGG CATAATTAGA AAAAAATCCA GCCTGGAAAT
  K
  TACAGACCAT AACTATTTGA CAGAAATGTA ATGCCCTGGG CATATAGAAA GCTCTTATGG
  TGTAGAAATA CCAAGCTGTC TCCAGATTCT AGTTGGTTGC T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132932384	ENSMUSSNP4653453	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48702312					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4652477 () rs orientation: forward

Symbol	Name	Function Class
Rr626043	regulatory region 626043	92 bp proximal
Rr626044	regulatory region 626044	435 bp proximal
Rr626045	regulatory region 626045	1630 bp proximal