rs48680649 SNP Detail

Summary

• ID
  rs48680649
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114440628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTTTTTTGTA GTGGATGGTT TTAGATGCTT TTTCAAAGAT
  GAAGAGAACA TAGGTGTGTG GGTTCATTTC TGGGTCTTCA ATTCTATTCC ATTGAACTAC
  C
  TGACTGCCCC AGAGCTCCCA GGGACTTGAC CACAAACAAA AGAGTACACA AGAATGCCAT
  GGATCCATGA GGCAGAGGAA TTACCTTGTT GGCATCAGTG G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss138784355	ENSMUSSNP3450946	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48680649					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114440628 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1999 bp downstream