rs48677784 SNP Detail

Summary

• ID
  rs48677784
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114441654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AATTTCCTTT CATAAAGAAA GCAAGCCTTC TACAATATCA
  TCTCCATATA GCATATCAGG TTACAGTAAG ACTTGCCAGA TCTCCCCATA CTAAGGATGG
  G
  CCAAGCCAAA CCAGTTGGAG TACGAGGATC CCAGTGTCAG GCAAATGTGT CAGAGACAGA
  CCCAGATTGC ACAACAAGCT ATAACATATA TAACATCTAA T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss138784472	ENSMUSSNP3232155	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs48677784					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114441654 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	973 bp downstream
Tssr3975	transcription start site region 3975	1457 bp downstream
Tssr118082	transcription start site region 118082	1472 bp downstream