rs48674814 SNP Detail

Summary

• ID
  rs48674814
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:146067401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGGGAGAATT TTAATTATTC TAAAGGGCCA AGTAGGAGAA
  GGCAGAAACT GTATATATGG ATGTAACACA AGTTTAGCGA CTGGGTTTGG AGAGAGGGCT
  C
  TAAAATAAGT TTCCAGTCAG GTAAGCCAAC CACTGGGCGC AGGAGCAGGG GCGAGGGAGT
  GAACACCATC TGTTTGGGGT ATTAAATTTA ATAATAGGCA A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147857134	ENSMUSSNP985321	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48674814					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:146067401 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12367	CpG island 12367	1492 bp distal
Insm1	insulinoma-associated 1	461 bp downstream
Rr566646	regulatory region 566646	75 bp proximal
Rr566647	regulatory region 566647	818 bp proximal