rs48662337 SNP Detail

Summary

• ID
  rs48662337
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108385935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGACCTCT ATGAGTACTG AAGCTTGCTG CTGGGTGGTT
  GGGAGCGCAG GGCAGGCTGT TCTTCCGGAA GATTCCAGTC CCAGCTGACC TGAATGGGGA
  R
  AAGAGGTTGA GTCAGCGCTC TGCTGGCCTC TCTTAGCAGT TTTGGATAAT TTTATCCTTG
  CCCAGCCTTT GTCTTATACT AGAACACAAA GGTAACTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133501792	ENSMUSSNP2169001	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48662337					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108385935 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636092	regulatory region 636092	1067 bp distal
Rr636093	regulatory region 636093	383 bp distal
Rr636094	regulatory region 636094	843 bp distal
Rr636095	regulatory region 636095	615 bp distal