rs48660765 SNP Detail

Summary

• ID
  rs48660765
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106642143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAATAACTA CCCTCCTTTG AAGACATTTG GGTTGTTTTT
  TTGAGATGGG AATCTCATTC TGACCCCAGG CTGACCTCAA ACTTACCATA TAGCCCAGGC
  W
  GGTAAGTGCT CTCCACATGC CAGTGTTGCA GACCCCGCCC ACCATGCCAG CTGCGTTTAC
  TTCTTTAATC TTCACACCGC CCTAATAGCT GGGTGTCCC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147171767	ENSMUSSNP1975237	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
ss321247206	CHEV_4_106457551	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48660765					SNP	T	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106642143 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	397 bp proximal