rs48660568 SNP Detail

Summary

• ID
  rs48660568
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101260333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAATAAAA CACATTTTTA
  GGTAGTTGGG TTCTACATCA AAGAATGCCA CTACATTAAT GTTAAATTTA TATTTTTAGA
  AGTATTCTTT CTTATTGGGT CCCTGGAGAG ACAGTCCCAT GGTTAAGAGT GCCCACTGTT
  CTTCCAGAGC ACTGAACTGA GAGTTGAGAA ATGAGTCCAG AAGATGACAC AGAGGTGGCT
  R
  CAGAAGCACA TGGCTGGGAC AGGAGTTCAG TCACAGCCAG CATCCTACAG GACAAAGGCC
  TCGTGCTGAT CACTGGTAGG ACAAACTCAC AACCTCCTGT AACTCCAGCT CATGGCATCC
  AGCGCCCTGT CTGGCCTCTG GGTACCTGAA GGCACATGGC ATACAAACAT ACATACATAC
  ACATCAATAA AAATATTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss135546691	ENSMUSSNP5868662	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs48660568					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101260333 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	within coordinates
Rr582016	regulatory region 582016	1933 bp distal
Rr582017	regulatory region 582017	1201 bp proximal
Rr582018	regulatory region 582018	1439 bp proximal