rs48655795 SNP Detail

Summary

• ID
  rs48655795
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32455704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AGGAAACTCA AGGAAGTTGT TAGCTTTAAG CCCCTCTGCT
  ATCTCCCAAG AGGTCAGTCG GAGTCAACCT GGCATTTCTC TTCCCCCCCC ACACACACCC
  A
  TAAGATTCCC TTCCCTTCCC TCATACTTGC TTTTAACAAA TTTTTTCCAT ATTTTCATTT
  CTTTTTCTTG GACTACAGAA AGGTCTTTGT AAGCACAAAG C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss133100250	ENSMUSSNP4732932	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48655795					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32455704 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628114	regulatory region 628114	234 bp proximal
Rr628115	regulatory region 628115	727 bp proximal