rs48651091 SNP Detail

Summary

• ID
  rs48651091
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31486279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAAATTA GGGAAACAAC
  ACCCTTCACA ATAGTCACAA ATAATATAAA ATACCTTGGT CTGACTCTAA TTAAGGAAGT
  GAAAGATCTA CATGACAACA ACTTCAATTC TCTGAAGAAA GAAATTGACT AAGATCTCAG
  AAGATGGAAC GATGCCCCAT GCTCATGGAT TGGCAGGATT AATACAGTAA ATATGGCTAT
  Y
  CTGCAGAACG CAATCTATAG ATTCAGGGTC ATAGCAGCTT TATTCATAAT ATCCAGAAGG
  TGGAAAGAAG CCAGCTCTCC CTCAACAGAG AAATGGATAC AGAAAATGTG GTACATTTAC
  ACAATGGATT ACTACTCAGC TATTAAAAAC AATGAATTTA TGAAATTCTT GGGCAAATGG
  ATGTATCTGG AGGGTATCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134735699	ENSMUSSNP989711	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48651091					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31486279 () rs orientation: forward

Symbol	Name	Function Class
Rr574910	regulatory region 574910	1263 bp proximal