rs48631483 SNP Detail

Summary

• ID
  rs48631483
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135621983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTGTGCAC ATACCAGGCA
  TGGTGAAGAA TACTATAATC CCAACACTGG GTAGATGGAG ACAGCCAGCC TAGCCTTGCG
  GGTGAATCCT GGGTTCCAGT GAGAGACCTT GCAGCAAAAC TCAAGGTAGA TCTAGGAGGA
  TACAAGCTGG CATTCAACTG AGCCAGCAAC TGGCCCCCTC CACAGTTCTT GCTATGTCTT
  T
  ATAGCAAATT CCTCTGTTAG AGGTAATGCT GTGTGGAATG GTGTCTTAGC TAGGGTTTCG
  TTGCTATGAA GAGACACCAT GACCAAGGCA ACTCTTACAG CCAAGCATAT TCAAACCACC
  ACAAATAGCA AACAAGCCTA GCTTCAGGTA CCTGCTTGGG TTCCTGCCTT GATGTCTCTC
  TCAATAAGAA ACTGTCACCT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147553157	ENSMUSSNP3210264	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs48631483					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135621983 () rs orientation: forward

Symbol	Name	Function Class
Cnr2	cannabinoid receptor 2	722 bp upstream
Rr602181	regulatory region 602181	1523 bp distal
Rr602182	regulatory region 602182	1207 bp distal
Rr602183	regulatory region 602183	319 bp proximal
Rr602184	regulatory region 602184	733 bp proximal
Rr602185	regulatory region 602185	1299 bp proximal
Tssr39650	transcription start site region 39650	508 bp upstream
Tssr39651	transcription start site region 39651	712 bp upstream
Tssr39652	transcription start site region 39652	742 bp upstream