rs48629559 SNP Detail

Summary

• ID
  rs48629559
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79958310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAA CTTGAGAAAC TATAGTCATG
  M
  AATAAAATAC CTTTAAAAGA GATAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135378781	ENSMUSSNP6236953	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48629559					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79958310 () rs orientation: forward

Symbol	Name	Function Class
Gm65495	predicted gene, 65495	within coordinates
Rr578632	regulatory region 578632	1991 bp distal
Rr578633	regulatory region 578633	924 bp distal
Rr578634	regulatory region 578634	955 bp proximal
Rr578635	regulatory region 578635	1913 bp proximal