rs48627205 SNP Detail

Summary

• ID
  rs48627205
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144287986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCACAGG AATTGTGCCA
  AAATGCATGT TCTTCACCAA CACACCAAAG TTATTCTTTG ATACCAAGAG GTCTTGTATA
  AAGCAGAAAA AGCGGGGCAT GGGGCAAATT TTCATCTTCT CCAGTACATT CCCCTGGGGA
  GACAAAGAAC AAAAGACCAG TTGGCTACAG TTCAAATCCA CTTTATAGCT ATTGCCCAGT
  W
  TTCTGTGTGG CTCAACTCAG GGCTGAACTA TCTCTCCTAA TTAGGTGGAA TTGTTTATGT
  AAGCAAGTGA GTGCCTGGTT GTGAAACGAG GGACATGAAG TAGAAGAGAA AAGTTATGCT
  TCACTGACAG CAGGATTTCC CAGGGGCCTT TGCAACAAAC ACCAGATGCC CCATGGTGTT
  TGTTCTATGC TAGCTCTCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147827823	ENSMUSSNP3639441	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48627205					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144287986 () rs orientation: forward

Symbol	Name	Function Class
Aadacl4fm2	AADACL4 family member 2	Intron
Rr604231	regulatory region 604231	1398 bp distal