rs48605258 SNP Detail

Summary

• ID
  rs48605258
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:178285218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGC TGAGAAGGAC AGCAAACCCC
  G
  GGGGATCCGG GAGGCACTGC CTGGC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148366901	ENSMUSSNP3509649	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320628620	CHEV_2_178378130	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs48605258					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:178285218 () rs orientation: forward

Symbol	Name	Function Class
Rr572444	regulatory region 572444	1041 bp distal
Rr572445	regulatory region 572445	within coordinates
Rr572446	regulatory region 572446	345 bp proximal