rs48585122 SNP Detail

Summary

• ID
  rs48585122
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7731079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTTATTG GATCAGAGCT
  CCTAATATTG AGGAATCAGT AGGATTCCGT TGCTTTGGAG GCCGGAGAGA AAATGCTATT
  TCTTTGTATG CCCCAGCTTC TAGAGACGAC CCATATCCCA GACTCACAGC CAATTCCTAA
  TTCACCTTCA GCTTCTGTTT CTGTCATCCT TGTCCTCAAA GGCTTCTGCT TTCTGCTCAC
  R
  GTGACTCTAA GAATCGCCTG GGGCCCACCC ACACAGTTCT GAGATAGTAT CTCCATTTCA
  AGATCTTTAA CGTACGTATA TCAATCTAAT CAAGGTCCCT TTTGCTGTAA AAGCCAGGAC
  ACTCACTGTG CAGAGGAAGA GTACAAAGTA CTTAACCTGA CACTTTAGCA TGAGGTTTAG
  TTTGAACAGA AAGCCACTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss132954066	ENSMUSSNP6880190	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48585122					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7731079 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	1093 bp proximal
Rr626315	regulatory region 626315	1898 bp proximal