rs48571592 SNP Detail

Summary

• ID
  rs48571592
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:139423291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACCAATGTA GTCAAACTAA AAATGTCTTG AGGCTTAAAT
  TTAGTAATGA GCATAAGCAG TGGAGCCCAT TTAGCACCAG TCCAGCCCAG ACTCAATTTT
  S
  CATGATTGAG GGTCTCCTGT GAGTCCCCTT TTGGTGCCAT TGTGGGCGGA GGCTTTATCA
  GGATCTGTGC TCTGGGGGTC TCTAGTTTCC ATACCCTGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147678733	ENSMUSSNP336810	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
ss321383590	CHEV_4_139251895	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48571592					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139423291 () rs orientation: forward

Symbol	Name	Function Class
Rr603286	regulatory region 603286	1723 bp proximal