rs48570994 SNP Detail

Summary

• ID
  rs48570994
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144925948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTACACTT TCCTAAGACA
  GCACCACCTG GTGGGGACCA AATGTTATAA CATATGAGCC TGTGGTGGAC ACTTCACATT
  CAGCCCAGAG CAATCTCCAG GTTTATCTTT CTTAAATGGA CCAAGAGAAG ATTGGGGTTC
  ACTAGAGAGA GAAAGTATTT GTGGATTTAT AAGGAATAAA TAAAACAGTA TTAGAGGACT
  R
  ATTGCTTTTT AAAGAATAGG CATGTTCTTA AATCAAATAG CTCAGCTGAT GGTTGAAATA
  ACTACAATGT TCTCAATATA TTCATGTTGA AATTGCTAAC GTTATGAATT CCAACCCTCT
  GAAAGCTTTC GAAGAAAAAA ACCAGAATGT TACTTGTTTT CCTGTTTTGT TTTTCCACTA
  GAAATCAAAA CCTCTTGATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136035855	ENSMUSSNP3636768	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48570994					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144925948 () rs orientation: forward

Symbol	Name	Function Class
Rr586766	regulatory region 586766	162 bp distal