rs48553434 SNP Detail

Summary

• ID
  rs48553434
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60703639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCGTCCCT TCCTTGTCCC
  CACAGGGGTG CCTGGTTGAG AAGAGAGCAT CCCCTGGAGC TTGTAGCTAG CTCTGCCTCT
  TCTCGCATCC TCTCTAGGTG CTACTGCATT GTGCACTACT GTAGCTCTCA ACCATGACCT
  TGCTTCAGAT GCCCCTGTTT CTGACTGTAA AGCTTTTATC TCCTGTCTCT TGTCCAGTAG
  R
  AAAATCACAG AGCAAAATGA ATAGCTTGAA AAAGGGTTGG GGTGGGGGAC ATACAATTTT
  TAAATTAAAT TATAATATAC TCATTCAGAT TTAGTGTATT TTTCCCCTCA ACAACGAGTT
  TACAGAAAAT AGACAACTGC TATATTAAAA GCCTGATAGC CATATGACCG TATTGCTGGT
  TGTGCTGGCA AACACCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135220949	ENSMUSSNP1992004	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48553434					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60703639 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Gm38326	predicted gene, 38326	1490 bp downstream
Rr577459	regulatory region 577459	1608 bp proximal