rs48542944 SNP Detail

Summary

• ID
  rs48542944
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:49424226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGCAAGCTAG AAAGAGCAAG ATGATAAGCA GTGTCCCTCT
  GTAGTTTTAC TTCAAGCTCT TGCCTTGAAT TCCTGCCCTA GCTTCCCTTA ATAATGAAGA
  K
  AAACCACAAA ATTAACTAAG CCCTGTCCTC CAAAACTTGT ATTTGGTCAG TGCTTTGTCA
  CACCAACAGA AAGCAAACTA ATTGTCTTAC CTCGGGATGG C                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132112587	ENSMUSSNP4524536	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48542944					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:49424226 () rs orientation: forward

Symbol	Name	Function Class
Or2y12	olfactory receptor family 2 subfamily Y member 12	Intron