rs48526395 SNP Detail

Summary

• ID
  rs48526395
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140475292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTA TGTGAGCCTC AAAGGGCGCA
  A
  GGAAGTGCCA CCTGGACCTG CCTTA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147711134	ENSMUSSNP5721268	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48526395					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140475292 () rs orientation: forward

Symbol	Name	Function Class
Gm69576	predicted gene, 69576	144 bp upstream
Padi4	peptidyl arginine deiminase, type IV	Intron
Rr603538	regulatory region 603538	within coordinates
Rr603539	regulatory region 603539	67 bp distal
Rr603540	regulatory region 603540	132 bp proximal