rs48522924 SNP Detail

Summary

• ID
  rs48522924
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31486228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCAAACA AATAAGTGAC
  CTTTCTCTAC ACAAAGGATA AACAGGACGA GAAAGAAATT AGGGAAACAA CACCCTTCAC
  AATAGTCACA AATAATATAA AATACCTTGG TCTGACTCTA ATTAAGGAAG TGAAAGATCT
  ACATGACAAC AACTTCAATT CTCTGAAGAA AGAAATTGAC TAAGATCTCA GAAGATGGAA
  M
  GATGCCCCAT GCTCATGGAT TGGCAGGATT AATACAGTAA ATATGGCTAT TCTGCAGAAC
  GCAATCTATA GATTCAGGGT CATAGCAGCT TTATTCATAA TATCCAGAAG GTGGAAAGAA
  GCCAGCTCTC CCTCAACAGA GAAATGGATA CAGAAAATGT GGTACATTTA CACAATGGAT
  TACTACTCAG CTATTAAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134735693	ENSMUSSNP5595388	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48522924					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31486228 () rs orientation: forward

Symbol	Name	Function Class
Rr574910	regulatory region 574910	1314 bp proximal