rs48495851 SNP Detail

Summary

• ID
  rs48495851
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108711960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTATTTCTGA GGTTTATCGC AATGAGACTC TATCACCATA
  CTGCTCTCCA TGCTGCTTCT TACAGTGTAG CTGCTTTTGT GATTAGTCTT GGGTGCTTTG
  K
  TTCTTCAGAA AAGTCCAAGG CAAGAACTGA CAAATACGTT TTGAAGTAAG GAATAAACCA
  CCAGTGGGAC CATTTTCTTA GGAAAAAAAA TATGTTTGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133508219	ENSMUSSNP2884778	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48495851					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108711960 () rs orientation: forward

Symbol	Name	Function Class
Rr636189	regulatory region 636189	1003 bp proximal
Rr636190	regulatory region 636190	1329 bp proximal