rs48485762 SNP Detail

Summary

• ID
  rs48485762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106546279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TGACCACAAA TGCTGGTCCT CAGCACAGAG CACTTCCCAA
  GCCATTCTGG GGCCACTGCA AATCTGCAGG GTCAGTGAAA GCACTCAGCA TTTCCAGCAC
  Y
  CCCAGCCCCC TCCCCCAGAG TCCCCACCCT GTGGACATCC TGATAAGACT CCTGTCACTA
  GAACACTGCA TGGGAATTTC TAGTGCAGAA AAGGGAGCCA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147170398	ENSMUSSNP4582823	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48485762					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106546279 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mroh7	maestro heat-like repeat family member 7			Intron
				Noncoding-Transcript-Variant
Rr596793	regulatory region 596793			within coordinates