rs48479166 SNP Detail

Summary

• ID
  rs48479166
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144925945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTGTACA CTTTCCTAAG
  ACAGCACCAC CTGGTGGGGA CCAAATGTTA TAACATATGA GCCTGTGGTG GACACTTCAC
  ATTCAGCCCA GAGCAATCTC CAGGTTTATC TTTCTTAAAT GGACCAAGAG AAGATTGGGG
  TTCACTAGAG AGAGAAAGTA TTTGTGGATT TATAAGGAAT AAATAAAACA GTATTAGAGG
  R
  CTGATTGCTT TTTAAAGAAT AGGCATGTTC TTAAATCAAA TAGCTCAGCT GATGGTTGAA
  ATAACTACAA TGTTCTCAAT ATATTCATGT TGAAATTGCT AACGTTATGA ATTCCAACCC
  TCTGAAAGCT TTCGAAGAAA AAAACCAGAA TGTTACTTGT TTTCCTGTTT TGTTTTTCCA
  CTAGAAATCA AAACCTCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136035852	ENSMUSSNP2391933	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48479166					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144925945 () rs orientation: forward

Symbol	Name	Function Class
Rr586766	regulatory region 586766	159 bp distal