rs48450991 SNP Detail

Summary

• ID
  rs48450991
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153387480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCTTACAC CTGACAGGCA GGACTCAACA TCTGAAAGCA
  GCTCTTCCAT AGGCTCCCAG CCCCAGGAGG GAATAAGAGG CCTGAGGCCA CTCATCCCCT
  M
  CCACTGCCAC ATCCCTGACA ACTTGTCACA TCAACCTCCA GATTGGCACT AGCCTGCTCT
  GTGCACTAAT CTGACCCCCC TGACAAGCAG ATGGAGAAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147996058	ENSMUSSNP6071112	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48450991					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153387480 () rs orientation: forward

Symbol	Name	Function Class
Gm75205	predicted gene, 75205	1676 bp upstream
Gm75208	predicted gene, 75208	1769 bp upstream
Gm75218	predicted gene, 75218	898 bp downstream
Rr567674	regulatory region 567674	1912 bp distal
Rr567675	regulatory region 567675	1279 bp distal
Rr567676	regulatory region 567676	440 bp distal
Rr567677	regulatory region 567677	1186 bp proximal
Rr567678	regulatory region 567678	1687 bp proximal