rs48446626 SNP Detail

Summary

• ID
  rs48446626
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129815365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAGCTAC TGCGTGGCAG
  AGCTGGGCAG AAGCCAGCAT GTGAGTTACA GTATCCTTGC CCCAAAAGTT TGTCCTCTTG
  GGCCATCTGA CCCCTGTATG CAGGCTAGGG GAGAGGCTGG AGTCATCCTA CAAGTCTCTG
  CAGAGAGAAG AGCCTCCTCC TCCTGTAGCA CCAAGGGTGT GGAGAGCGAT ACCAGGCTTC
  G
  GAAGGACTTG CTCCCCAGGG CTGCAGCTCT ATTTTTAGCC TCAAATCCAT CAATAAATGG
  AGTCTGGTGG AGCCAGAGAC TCTTGGCTGC CTGATACTAA GAGCAAGAGG ATCATTTATT
  AAGCACTTCC CGTGCAGGGC ATCGTGTGGC GTCTAACTGG ACTGTGAGCT TCGGTTGGCA
  CACGACTGCC ATCGTCACCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147454217	ENSMUSSNP6134832	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48446626					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129815365 () rs orientation: forward

Symbol	Name	Function Class
Rr600382	regulatory region 600382	81 bp distal
Rr600383	regulatory region 600383	1967 bp proximal