rs48426534 SNP Detail

Summary

• ID
  rs48426534
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101295372 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCCCTTA ACCTAGAGGT
  TTGTAGTCTT TCCCGGGGAC TCCCGGGGAC ATAGATCATT GTCAGCTTGG TCGCTGAGTC
  CTGCTCTATA CAGAAACCTG AAAAAAAGGA AAAGCCAGTG AGAGGCCAGC AGTCAAGGGG
  AGCAGACAGC AGGGCTGGGG GTTGAGGGCA GATTATGGCT TCTGTTCTAA GGCTGCATGG
  A
  CTTTGGCAAG TGTTTTTGTA TCACCAGCCT CTGCTTCTGA CAGCACAAAG GCTCTCCTGA
  TTTCCCGTTC TTCCTACAGA GGCATGCTGG CAATGAATGC TGGCCCGGCT TGTCATATTT
  TCAACTTGGT CTACATTATA GGCATGTCAT TTGTGAAAAC ATGTCTCTAT AAGAGGAAGG
  AAAGTAACTA CTATACAAAG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147073797	ENSMUSSNP4118943	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48426534					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101295372 () rs orientation: forward

Symbol	Name	Function Class
Rr561501	regulatory region 561501	203 bp distal