rs48424995 SNP Detail

Summary

• ID
  rs48424995
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:28777481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGG AGCATCTATC TCAAGGTTCC
  S
  CATCAGGACA CTGTAGCAAA CCAAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134715761	ENSMUSSNP38245	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48424995					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28777481 () rs orientation: forward

Symbol	Name	Function Class
1700112D23Rik	RIKEN cDNA 1700112D23 gene	within coordinates
Rr574624	regulatory region 574624	470 bp distal
Rr574625	regulatory region 574625	400 bp proximal
Rr574626	regulatory region 574626	1778 bp proximal
Slc2a2	solute carrier family 2 (facilitated glucose transporter), member 2	Intron
Tssr28655	transcription start site region 28655	1785 bp downstream