rs48424136 SNP Detail

Summary

• ID
  rs48424136
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143448521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTC CTCCCTTAAC TCTTATCCTT
  T
  TCAGCTCCAA CAGTCACAAC AGTCT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136026120	ENSMUSSNP2478069	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48424136					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143448521 () rs orientation: forward

Symbol	Name	Function Class
Gm33867	predicted gene, 33867	518 bp upstream
Gm42705	predicted gene 42705	617 bp upstream
Rr586558	regulatory region 586558	127 bp proximal
Rr586559	regulatory region 586559	216 bp proximal
Rr586560	regulatory region 586560	628 bp proximal