rs48413776 SNP Detail

Summary

• ID
  rs48413776
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31510779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTT TTATACCATT CTACAGGTAC
  R
  TGAAGAGAAT AGGGTTAGTT CTTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134736271	ENSMUSSNP1093905	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320694310	CHEV_3_31355552	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48413776					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31510779 () rs orientation: forward

Symbol	Name	Function Class
Rr374770	regulatory region 374770	1038 bp downstream
Rr574911	regulatory region 574911	1383 bp proximal