rs48360762 SNP Detail

Summary

• ID
  rs48360762
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86991015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCGCCCAT CAAAACGAGT
  AGGGCCAGGG GCACGGTAGT CAGCATACAG CACCGCCCTG GAGGACGGGC GATCTTCGTG
  GGCGCGCACA TTGTAATAAC CATTGGTGGG ATCCTGAGGG CAAGAAGAGA AAAGGGTAAA
  TGTGGGAACT TCCCCCAGTG TAATAAGCTC TCCTGAGTCT TCTGCCCATG CCCAGCTCAA
  T
  CCATGTCTCC TCCCCTTCTC ACCATACCGG TGATTCTATC TTCTGTTCCT TCTGCAGACT
  TCTTGACCAC TCCTCCCTGC TGTCCTCCCC CTGCAGATCC TCCTACCCCA CGTCCCAGCC
  AGCCAGTCCT TGTGCCTTGC ATCAGTCCTT CCCCTCACCT TCATCTCATA CTCTTCCCGG
  GTGTCAATGG TGTCACAGCG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135453709	ENSMUSSNP1731581	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs48360762					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86991015 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr579434	regulatory region 579434	1041 bp distal
Rr579435	regulatory region 579435	1284 bp distal