rs48353369 SNP Detail

Summary

• ID
  rs48353369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121397029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGGCCAGC TCCTGCTTGC TTCATCTTCT TCCCAGCCTG
  ACACTACCTT ACATAGTCAT GGTCTTGTCT GCCTCCTTGC TCGAATGCCC TCCTCAGAAA
  R
  TCAGGGACTT CTACCTTGTT GACAGCCATT TCCCCAACCA CAGCTTAGAA TAAAGCAGGA
  ATTCCTTCAT TTCTTTCTCT CTTTGGTGCA TCATAGTGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135724901	ENSMUSSNP5191674	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320904171	CHEV_3_121306298	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48353369					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121397029 () rs orientation: forward

Symbol	Name	Function Class
Gm33485	predicted gene, 33485	within coordinates
Gm65954	predicted gene, 65954	1858 bp downstream
Rr584125	regulatory region 584125	779 bp distal
Rr584126	regulatory region 584126	1651 bp proximal