rs48318376 SNP Detail

Summary

• ID
  rs48318376
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAAGTATA CTAGTTTGAA
  ATATGCCCCT TGTGTTCCAA ATGTTACAGT GAGCTTCATC AAGGAACATT TCTGATTCAT
  TAGAATATTC ACATGATTTC ATAGGATATT ATCCTACACT CTAAAGATAT TAAAGATTTC
  ACTAAGATCT GATAAAGACG TTCAACAAAT AGAAATGGGG CTTAGTTTGA AGCTCACCAA
  R
  CTTCAAAAAT ATAACTAGAG ACAGACCTAC AAGGGGGGGA AAGCTCACTA CTATGAAAAC
  TTTAAAACAT TGAGGAAGAA ACTGGATGGT CTCAGGTTCA GGGGTGGGGC TTGGGGGAGG
  GTAGAGTTAA TATTAAGGAA AGGACTGTAT TACCAAGAAA GATCTGGGGC TTGTTGCAGT
  CTTCATCAAA ATAACAATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136098050	ENSMUSSNP4763304	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48318376					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478199 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1503 bp distal
Rr587416	regulatory region 587416	1176 bp distal
Rr587417	regulatory region 587417	1245 bp distal