rs48317919 SNP Detail

Summary

• ID
  rs48317919
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144284823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTATTTGAT TTCTAGTTGG
  TAGCACTCTT TAGCAAGGTT TAGCAAGCCT TTGGGGGTGG AGCCTTGCTG GGAGAAGGAT
  ATCATTGTGA GTGGGACTTG GTTTTTTTAT ATCTTTGTCC TATTTCCTAT TGACTCTCTG
  CTTTGTGCTT ATGATTGTGG ATATGTGCTC TCTGCTTGAT ACTTCTACTG CCCTTCCTGA
  W
  GCTAGCTGAC TCTCAGCCTC CTGGAACCAT GAACTGAAGT AAATTCCATT TTCCTTAAGT
  GTCCTTTGGT TGTGGTGTTT TATAACACCA ACAAGAAAGT AACTAAGACA CTCTGATTCC
  TAGATCCATC ACTTATTTTT TTCTAACATC AATTTATTAG GTCTCTATTG GGTTTGGTGT
  CAATTGTTGA ACAGTTTTAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147827679	ENSMUSSNP1328354	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48317919					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144284823 () rs orientation: forward

Symbol	Name	Function Class
Aadacl4fm2	AADACL4 family member 2	Intron
Rr604231	regulatory region 604231	1744 bp proximal